Transcript: ENSDART00000103480.4 ccdc187-201

Description

coiled-coil domain containing 187 [Source:ZFIN;Acc:ZDB-GENE-070410-81]

Gene Synonyms

zgc:162431

Location

Chromosome 23: 30,013,240-30,045,733 reverse strand.

About this transcript

This transcript has 12 exons, is annotated with 13 domains and features, is associated with 393 variant alleles and maps to 135 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000053857.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000103480.4	ccdc187-201	2132	347aa	ENSDARP00000094256.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M1NED7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000122239.4	ccdc187-202	1313	345aa	ENSDARP00000107487.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000127192.4	ccdc187-203	807	243aa	ENSDARP00000106903.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000131209.2	ccdc187-204	492	134aa	ENSDARP00000120743.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000146869.2	ccdc187-205	736	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 2,132 bps, Translation length: 347 residues

Version

ENSDART00000103480.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Upcoming Ensembl Platform Transition

Transcript: ENSDART00000103480.4 ccdc187-201

Summary

About Us

Get help

Our sister sites

Follow us

Upcoming Ensembl Platform Transition

Favourite species

All species

Recent locations

Transcript: ENSDART00000103480.4 ccdc187-201

Summary

About Us

Get help

Our sister sites

Follow us