Transcript: ENSDART00000103418.5 vtg3-202

Description

vitellogenin 3, phosvitinless [Source:ZFIN;Acc:ZDB-GENE-991019-2]

Location

About this transcript

This transcript has 28 exons, is annotated with 28 domains and features, is associated with 716 variant alleles and maps to 159 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000103418.5	vtg3-202	4182	1260aa	ENSDARP00000094194.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000014979.8	vtg3-201	4246	1253aa	ENSDARP00000023158.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QQQ3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000165379.2	vtg3-203	490	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 28, Coding exons: 27, Transcript length: 4,182 bps, Translation length: 1,260 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000103418.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.