Transcript: ENSDART00000103176.5 bcam-201

Description

basal cell adhesion molecule (Lutheran blood group) [Source:ZFIN;Acc:ZDB-GENE-060929-620]

Gene Synonyms

LU, zgc:154034

Location

About this transcript

This transcript has 13 exons, is annotated with 35 domains and features, is associated with 110 variant alleles and maps to 197 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000103176.5	bcam-201	1963	547aa	ENSDARP00000093952.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q08BX5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000136982.3	bcam-202	729	243aa	ENSDARP00000122605.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QVA6	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000171819.2	bcam-203	553	114aa	ENSDARP00000136667.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IPM3	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 1,963 bps, Translation length: 547 residues

Version

ENSDART00000103176.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.