Transcript: ENSDART00000103150.5 CALCOCO1-201

Description

calcium binding and coiled-coil domain 1a [Source:ZFIN;Acc:ZDB-GENE-030131-6911]

Location

About this transcript

This transcript has 15 exons, is annotated with 22 domains and features, is associated with 334 variant alleles and maps to 232 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000103150.5	CALCOCO1-201	3327	640aa	ENSDARP00000093924.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2BGD5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000164699.3	CALCOCO1-203	2224	651aa	ENSDARP00000131607.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IFJ0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000129574.3	CALCOCO1-202	620	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 15, Coding exons: 14, Transcript length: 3,327 bps, Translation length: 640 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A2BGD5

Version

ENSDART00000103150.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.