Transcript: ENSDART00000102981.4 col8a1a-201

Description

collagen, type VIII, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-070912-274]

Gene Synonyms

Col8A1.1, col8a1, gul, gulliver, lev, leviathan, si:ch211-283e2.6, wu:fb18b08

Location

About this transcript

This transcript has 3 exons, is annotated with 30 domains and features, is associated with 624 variant alleles and maps to 100 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000102981.4	col8a1a-201	2256	711aa	ENSDARP00000093755.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0S5W0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 2,256 bps, Translation length: 711 residues

Version

ENSDART00000102981.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.