Transcript: ENSDART00000102870.5 slc41a1-201

Description

solute carrier family 41 member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4700]

Gene Synonyms

fd54c09, wu:fd54c09

Location

About this transcript

This transcript has 11 exons, is annotated with 43 domains and features, is associated with 1453 variant alleles and maps to 173 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000102870.5	slc41a1-201	3144	544aa	ENSDARP00000093644.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9Q0L4 E7EXX2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000192096.1	slc41a1-202	1635	544aa	ENSDARP00000147185.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9Q0L4 E7EXX2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 3,144 bps, Translation length: 544 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: E7EXX2

Version

ENSDART00000102870.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.