Transcript: ENSDART00000102847.5 mhc2d8.37a2-201

Description

major histocompatibility complex class II d8.37a2 [Source:ZFIN;Acc:ZDB-GENE-091204-3]

Gene Synonyms

MHC class II, alpha chain, si:busm1-160c18.6, si:dz160c18.6, si:zfos-2070c2.1

Location

About this transcript

This transcript has 4 exons, is annotated with 22 domains and features, is associated with 483 variant alleles and maps to 177 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000102847.5	mhc2d8.37a2-201	1932	235aa	ENSDARP00000093621.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R0K2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000140959.2	mhc2d8.37a2-202	887	190aa	ENSDARP00000120024.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,932 bps, Translation length: 235 residues

Version

ENSDART00000102847.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.