Transcript: ENSDART00000102843.5 src-201

Description

v-src avian sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog [Source:NCBI gene;Acc:325084]

Gene Synonyms

fc54g04, sb:cb864, wu:fc54g04

Location

Chromosome 23: 39,346,930-39,450,700 forward strand.

About this transcript

This transcript has 12 exons, is annotated with 42 domains and features, is associated with 1657 variant alleles and maps to 209 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000008107.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000102843.5	src-201	2737	534aa	ENSDARP00000093618.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1JPZ3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000190985.1	src-204	2176	540aa	ENSDARP00000152013.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QE56	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000184254.1	src-203	1619	534aa	ENSDARP00000151348.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1JPZ3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000149819.2	src-202	736	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 2,737 bps, Translation length: 534 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q1JPZ3

Version

ENSDART00000102843.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000102843.5 src-201

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Transcript: ENSDART00000102843.5 src-201

Summary

About Us

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