Transcript: ENSDART00000102678.5 nmt1a-201

Description

N-myristoyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-050522-477]

Gene Synonyms

im:2601337, nmt1, wu:fc15d01, wu:fc18a04, zgc:110714

Location

About this transcript

This transcript has 13 exons, is associated with 23 variant alleles and maps to 218 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000124845.3	nmt1a-202	2248	505aa	ENSDARP00000105829.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QY00	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000102678.5	nmt1a-201	2669	346aa	ENSDARP00000124689.1	Nonsense mediated decay	F8W2L2	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 13, Coding exons: 10, Transcript length: 2,669 bps, Translation length: 346 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000102678.5

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.