Transcript: ENSDART00000102552.5 trmt11-201

Description

tRNA methyltransferase 11 [Source:ZFIN;Acc:ZDB-GENE-040426-953]

Gene Synonyms

zgc:56233

Location

About this transcript

This transcript has 13 exons, is annotated with 13 domains and features, is associated with 570 variant alleles and maps to 158 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000102552.5	trmt11-201	1555	466aa	ENSDARP00000093328.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M1PGS2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000125484.3	trmt11-202	1397	384aa	ENSDARP00000111331.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000132457.3	trmt11-203	1082	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000139652.2	trmt11-204	869	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 1,555 bps, Translation length: 466 residues

Version

ENSDART00000102552.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.