Transcript: ENSDART00000102520.5 palm1a-201

Description

paralemmin 1a [Source:ZFIN;Acc:ZDB-GENE-050417-409]

Gene Synonyms

palm, zgc:110136

Location

About this transcript

This transcript has 7 exons, is annotated with 18 domains and features, is associated with 1277 variant alleles and maps to 151 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000133172.3	palm1a-202	1170	365aa	ENSDARP00000117034.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QIM7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000102520.5	palm1a-201	1827	321aa	ENSDARP00000093296.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000146768.2	palm1a-203	385	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,827 bps, Translation length: 321 residues

Version

ENSDART00000102520.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.