Transcript: ENSDART00000102474.5 plekhs1.3-201

Description

pleckstrin homology domain containing S1, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-070112-592]

Location

Chromosome 12: 30,542,661-30,549,022 reverse strand.

About this transcript

This transcript has 14 exons, is annotated with 10 domains and features, is associated with 360 variant alleles and maps to 157 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000090526.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000102474.5	plekhs1.3-201	2124	421aa	ENSDARP00000093251.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9QEB7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000193616.1	plekhs1.3-204	3776	421aa	ENSDARP00000154985.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9QEB7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000153161.2	plekhs1.3-203	714	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000153096.2	plekhs1.3-202	524	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 14, Coding exons: 13, Transcript length: 2,124 bps, Translation length: 421 residues

Version

ENSDART00000102474.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000102474.5 plekhs1.3-201

Summary

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Transcript: ENSDART00000102474.5 plekhs1.3-201

Summary

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