Transcript: ENSDART00000101885.6 zdhhc18a-201

Description

zinc finger DHHC-type containing 18a [Source:ZFIN;Acc:ZDB-GENE-060929-424]

Gene Synonyms

zdhhc18, zgc:153461

Location

About this transcript

This transcript has 10 exons, is annotated with 13 domains and features, is associated with 486 variant alleles and maps to 298 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000101885.6	zdhhc18a-201	3368	467aa	ENSDARP00000092660.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FH11	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000130540.3	zdhhc18a-202	3351	467aa	ENSDARP00000112051.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FH11	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000134946.2	zdhhc18a-203	1047	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 3,368 bps, Translation length: 467 residues

Version

ENSDART00000101885.6

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.