Transcript: ENSDART00000101319.5 zgc:162396-201

Description

zgc:162396 [Source:ZFIN;Acc:ZDB-GENE-030131-1190]

Location

About this transcript

This transcript has 6 exons, is annotated with 6 domains and features, is associated with 282 variant alleles and maps to 264 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000101319.5	zgc:162396-201	1558	271aa	ENSDARP00000092093.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LYQ0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000147931.2	zgc:162396-202	660	130aa	ENSDARP00000115563.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,558 bps, Translation length: 271 residues

Version

ENSDART00000101319.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.