Transcript: ENSDART00000100307.5 zgc:110269-202

Description

zgc:110269 [Source:ZFIN;Acc:ZDB-GENE-050417-81]

Gene Synonyms

im:7147072

Location

About this transcript

This transcript has 4 exons, is annotated with 2 domains and features, is associated with 358 variant alleles and maps to 135 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000005381.8	zgc:110269-201	1454	350aa	ENSDARP00000017784.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0UXL7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000100307.5	zgc:110269-202	702	135aa	ENSDARP00000091080.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 702 bps, Translation length: 135 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000100307.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.