Transcript: ENSDART00000100278.6 SLC43A1-203

Description

solute carrier family 43 member 1a [Source:ZFIN;Acc:ZDB-GENE-030131-6327]

Gene Synonyms

fi47a12, lat3a, slc43a1, wu:fi47a12, zgc:55850

Location

About this transcript

This transcript has 5 exons, is annotated with 18 domains and features, is associated with 13 variant alleles and maps to 59 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000106147.6	SLC43A1-202	2963	536aa	ENSDARP00000096925.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F2Z4V7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000131489.3	SLC43A1-201	647	112aa	ENSDARP00000139447.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000100278.6	SLC43A1-203	608	160aa	ENSDARP00000135429.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 608 bps, Translation length: 160 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000100278.6

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.