Transcript: ENSDART00000100241.5 haao-201

Description

3-hydroxyanthranilate 3,4-dioxygenase [Source:ZFIN;Acc:ZDB-GENE-041114-89]

Gene Synonyms

zgc:103585

Location

Chromosome 13: 8,954,667-8,982,782 forward strand.

About this transcript

This transcript has 12 exons, is annotated with 11 domains and features, is associated with 1307 variant alleles and maps to 62 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000076487.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000100241.5	haao-201	1459	287aa	ENSDARP00000091014.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QYC7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000165721.2	haao-203	1058	287aa	ENSDARP00000131748.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QYC7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000169398.2	haao-204	894	273aa	ENSDARP00000138628.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000165692.2	haao-202	762	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 12, Coding exons: 10, Transcript length: 1,459 bps, Translation length: 287 residues

Version

ENSDART00000100241.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Upcoming Ensembl Platform Transition

Transcript: ENSDART00000100241.5 haao-201

Summary

About Us

Get help

Our sister sites

Follow us

Upcoming Ensembl Platform Transition

Favourite species

All species

Recent locations

Transcript: ENSDART00000100241.5 haao-201

Summary

About Us

Get help

Our sister sites

Follow us