Transcript: ENSDART00000100217.5 ACTN1-205

Description

actinin, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-081113-4]

Location

Chromosome 13: 36,321,088-36,391,496 reverse strand.

About this transcript

This transcript has 22 exons, is annotated with 48 domains and features, is associated with 22 variant alleles and maps to 174 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000007219.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000140243.3	ACTN1-204	3981	902aa	ENSDARP00000123299.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8JHU4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000100217.5	ACTN1-205	3664	902aa	ENSDARP00000090990.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8JHU4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000133740.3	ACTN1-202	3658	902aa	ENSDARP00000120755.1	Nonsense mediated decay	B8JHU4	-
ENSDART00000133858.2	ACTN1-203	993	209aa	ENSDARP00000123185.1	Nonsense mediated decay	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000135741.2	ACTN1-201	932	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 22, Coding exons: 21, Transcript length: 3,664 bps, Translation length: 902 residues

Version

ENSDART00000100217.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000100217.5 ACTN1-205

Summary

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Transcript: ENSDART00000100217.5 ACTN1-205

Summary

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