Transcript: ENSDART00000100131.5 si:ch211-242e8.1-201

Description

si:ch211-242e8.1 [Source:ZFIN;Acc:ZDB-GENE-060503-600]

Location

Chromosome 18: 16,960,971-16,971,684 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 19 domains and features, is associated with 550 variant alleles and maps to 149 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000069038.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000100131.5	si:ch211-242e8.1-201	3341	432aa	ENSDARP00000090904.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000193969.1	si:ch211-242e8.1-203	3552	358aa	ENSDARP00000154800.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000147583.2	si:ch211-242e8.1-202	472	157aa	ENSDARP00000122102.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 3,341 bps, Translation length: 432 residues

Version

ENSDART00000100131.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000100131.5 si:ch211-242e8.1-201

Summary

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Transcript: ENSDART00000100131.5 si:ch211-242e8.1-201

Summary

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