Transcript: ENSDART00000099994.5 hspa8-201

Description

heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]

Gene Synonyms

heat shock cognate 71-kd protein, hsc70, wu:fb01g06, wu:fi48b06

Location

Chromosome 10: 29,849,497-29,853,828 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 34 domains and features, is associated with 154 variant alleles and maps to 390 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000068992.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000099994.5	hspa8-201	2453	649aa	ENSDARP00000090766.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6NYR4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000180242.1	hspa8-205	6791	654aa	ENSDARP00000150450.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000168898.2	hspa8-204	1953	649aa	ENSDARP00000141099.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6NYR4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000141549.2	hspa8-203	678	127aa	ENSDARP00000121031.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000132212.2	hspa8-202	675	188aa	ENSDARP00000119867.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 2,453 bps, Translation length: 649 residues

Version

ENSDART00000099994.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

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Transcript: ENSDART00000099994.5 hspa8-201

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Transcript: ENSDART00000099994.5 hspa8-201

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