Transcript: ENSDART00000099760.4 si:dkey-56m15.2-201

Description

si:dkey-56m15.2 [Source:ZFIN;Acc:ZDB-GENE-110913-122]

Location

Chromosome 4: 55,055,405-55,066,432 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 35 domains and features, is associated with 68 variant alleles and maps to 675 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000101469.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000159142.2	si:dkey-56m15.2-204	4395	1260aa	ENSDARP00000135431.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H0WEA7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000099760.4	si:dkey-56m15.2-201	3293	1086aa	ENSDARP00000090533.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QRU9	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000157604.2	si:dkey-56m15.2-203	3021	960aa	ENSDARP00000140919.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IZ56	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000128531.3	si:dkey-56m15.2-202	2709	902aa	ENSDARP00000108606.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QWP8	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 3,293 bps, Translation length: 1,086 residues

Version

ENSDART00000099760.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000099760.4 si:dkey-56m15.2-201

Summary

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Transcript: ENSDART00000099760.4 si:dkey-56m15.2-201

Summary

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