Transcript: ENSDART00000099677.5 bloc1s3-201

Description

biosis of lysosomal organelles complex-1, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050913-10]

Gene Synonyms

hps8, zgc:114034

Location

Chromosome 15: 35,094,965-35,100,858 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 8 domains and features, is associated with 190 variant alleles and maps to 154 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000068828.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000109593.5	bloc1s3-202	1430	204aa	ENSDARP00000100799.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q4V924	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000178430.2	bloc1s3-203	4449	204aa	ENSDARP00000144507.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q4V924	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000099677.5	bloc1s3-201	952	204aa	ENSDARP00000090450.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q4V924	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 952 bps, Translation length: 204 residues

Version

ENSDART00000099677.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000099677.5 bloc1s3-201

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Transcript: ENSDART00000099677.5 bloc1s3-201

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