Transcript: ENSDART00000098970.7 LIN28A-204

Description

lin-28 homolog Ab [Source:ZFIN;Acc:ZDB-GENE-040426-747]

Location

Chromosome 19: 15,441,022-15,469,187 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 23 domains and features, is associated with 48 variant alleles and maps to 287 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000016999.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000098970.7	LIN28A-204	2020	202aa	ENSDARP00000089741.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q803L0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000182329.1	LIN28A-208	6269	194aa	ENSDARP00000148718.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3IS11	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000193355.1	LIN28A-207	5479	207aa	ENSDARP00000150782.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q8W5	-
ENSDART00000151732.3	LIN28A-206	908	194aa	ENSDARP00000125674.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3IS11	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000140276.2	LIN28A-205	607	59aa	ENSDARP00000126231.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000142509.2	LIN28A-202	547	179aa	ENSDARP00000113422.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000135923.3	LIN28A-203	494	102aa	ENSDARP00000116507.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000146548.2	LIN28A-201	793	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 2,020 bps, Translation length: 202 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q803L0

Version

ENSDART00000098970.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000098970.7 LIN28A-204

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Transcript: ENSDART00000098970.7 LIN28A-204

Summary

About Us

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