Transcript: ENSDART00000097528.6 SP4-202

Description

sp4 transcription factor [Source:ZFIN;Acc:ZDB-GENE-031202-3]

Location

Chromosome 19: 2,546,775-2,563,324 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 36 domains and features, is associated with 5 variant alleles and maps to 106 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000005186.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000097528.6	SP4-202	5359	714aa	ENSDARP00000088299.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000186630.1	SP4-203	2408	720aa	ENSDARP00000150009.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000148527.3	SP4-201	811	263aa	ENSDARP00000124780.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 5,359 bps, Translation length: 714 residues

Version

ENSDART00000097528.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000097528.6 SP4-202

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Transcript: ENSDART00000097528.6 SP4-202

Summary

About Us

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