Transcript: ENSDART00000097500.4 tmem176-201

Description

transmembrane protein 176 [Source:ZFIN;Acc:ZDB-GENE-080902-2]

Gene Synonyms

si:dkey-9i23.13

Location

Chromosome 1: 44,935,572-44,940,830 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 9 domains and features, is associated with 305 variant alleles and maps to 85 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000078659.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000097500.4	tmem176-201	891	230aa	ENSDARP00000088271.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A642	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000134464.3	tmem176-202	1042	190aa	ENSDARP00000115594.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A640	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000137216.3	tmem176-203	807	141aa	ENSDARP00000113255.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A641	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 891 bps, Translation length: 230 residues

Version

ENSDART00000097500.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000097500.4 tmem176-201

Summary

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Transcript: ENSDART00000097500.4 tmem176-201

Summary

About Us

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