Transcript: ENSDART00000093312.5 celf5a-202

Description

cugbp, Elav-like family member 5a [Source:ZFIN;Acc:ZDB-GENE-050208-746]

Location

About this transcript

This transcript has 11 exons, is annotated with 20 domains and features, is associated with 5330 variant alleles and maps to 234 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000093310.7	celf5a-201	1699	528aa	ENSDARP00000087742.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B3DJA7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000093312.5	celf5a-202	1519	506aa	ENSDARP00000087744.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 1,519 bps, Translation length: 506 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000093312.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.