Transcript: ENSDART00000092919.5 bbs4-201

Description

Bardet-Biedl syndrome 4 [Source:ZFIN;Acc:ZDB-GENE-060126-2]

Gene Synonyms

zgc:152964

Location

About this transcript

This transcript has 16 exons, is associated with 28 variant alleles and maps to 95 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000122929.4	bbs4-202	2367	528aa	ENSDARP00000104870.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7EXH4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000092919.5	bbs4-201	2324	359aa	ENSDARP00000087351.4	Nonsense mediated decay	F1RBR9	-
ENSDART00000139517.2	bbs4-203	779	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 16, Coding exons: 14, Transcript length: 2,324 bps, Translation length: 359 residues

Version

ENSDART00000092919.5

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.