Transcript: ENSDART00000092138.8 ubap2l-202

Description

ubiquitin associated protein 2-like [Source:ZFIN;Acc:ZDB-GENE-060503-244]

Gene Synonyms

sb:eu902, si:dkey-204a24.7

Location

Chromosome 19: 7,757,682-7,797,952 forward strand.

About this transcript

This transcript has 29 exons, is annotated with 55 domains and features, is associated with 892 variant alleles and maps to 225 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000063219.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000092138.8	ubap2l-202	5343	1196aa	ENSDARP00000086571.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9P1N2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000092112.8	ubap2l-201	5187	1144aa	ENSDARP00000086545.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1L8T3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000151400.3	ubap2l-203	5066	1144aa	ENSDARP00000125665.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1L8T3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000151573.2	ubap2l-204	726	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 29, Coding exons: 28, Transcript length: 5,343 bps, Translation length: 1,196 residues

Version

ENSDART00000092138.8

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000092138.8 ubap2l-202

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Transcript: ENSDART00000092138.8 ubap2l-202

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