Transcript: ENSDART00000092087.7 golga2-201

Description

golgin A2 [Source:ZFIN;Acc:ZDB-GENE-081030-1]

Gene Synonyms

cis-Golgi matrix protein GM130, drgm130, si:dkey-246l19.1

Location

Chromosome 5: 1,432,074-1,487,262 reverse strand.

About this transcript

This transcript has 27 exons, is annotated with 32 domains and features, is associated with 1038 variant alleles and maps to 147 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000063197.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000092087.7	golga2-201	3517	1028aa	ENSDARP00000086520.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1IH00	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000148464.2	golga2-204	540	168aa	ENSDARP00000124823.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000149599.3	golga2-205	513	161aa	ENSDARP00000123698.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000148411.2	golga2-203	250	72aa	ENSDARP00000124717.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000144156.2	golga2-202	612	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000150027.2	golga2-206	456	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 27, Coding exons: 27, Transcript length: 3,517 bps, Translation length: 1,028 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A1IH00

Version

ENSDART00000092087.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Upcoming Ensembl Platform Transition

Transcript: ENSDART00000092087.7 golga2-201

Summary

About Us

Get help

Our sister sites

Follow us

Upcoming Ensembl Platform Transition

Favourite species

All species

Recent locations

Transcript: ENSDART00000092087.7 golga2-201

Summary

About Us

Get help

Our sister sites

Follow us