Transcript: ENSDART00000092013.5 tmtc1-201

Description

transmembrane O-mannosyltransferase targeting cadherins 1 [Source:ZFIN;Acc:ZDB-GENE-070705-219]

Gene Synonyms

si:ch73-1o10.3

Location

About this transcript

This transcript has 20 exons, is annotated with 73 domains and features, is associated with 1908 variant alleles and maps to 329 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000092013.5	tmtc1-201	8773	872aa	ENSDARP00000086446.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QF84	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000191960.1	tmtc1-203	1287	428aa	ENSDARP00000150744.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000189690.1	tmtc1-202	966	50aa	ENSDARP00000147436.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 20, Coding exons: 20, Transcript length: 8,773 bps, Translation length: 872 residues

Version

ENSDART00000092013.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.