Transcript: ENSDART00000092002.5 POMT1-201

Description

protein-O-mannosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060929-966]

Gene Synonyms

zPOMT1, zgc:153731

Location

About this transcript

This transcript has 20 exons, is annotated with 50 domains and features, is associated with 229 variant alleles and maps to 159 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000092002.5	POMT1-201	3201	720aa	ENSDARP00000086435.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QF89	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000188552.1	POMT1-202	2166	720aa	ENSDARP00000155683.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QF89	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 20, Coding exons: 19, Transcript length: 3,201 bps, Translation length: 720 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: F1QF89

Version

ENSDART00000092002.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.