Transcript: ENSDART00000090922.5 dennd4a-201

Description

DENN/MADD domain containing 4A [Source:ZFIN;Acc:ZDB-GENE-060503-285]

Gene Synonyms

si:ch211-117i10.9

Location

Chromosome 18: 19,044,873-19,095,170 reverse strand.

About this transcript

This transcript has 29 exons, is annotated with 30 domains and features, is associated with 1320 variant alleles and maps to 160 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000062721.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000090962.6	dennd4a-202	5312	1674aa	ENSDARP00000085395.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LV52	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000177621.2	dennd4a-203	5719	1724aa	ENSDARP00000143721.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286Y972	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000188370.1	dennd4a-204	5692	1715aa	ENSDARP00000147166.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q0K6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000090922.5	dennd4a-201	5427	1714aa	ENSDARP00000085355.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QRM3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 29, Coding exons: 29, Transcript length: 5,427 bps, Translation length: 1,714 residues

Version

ENSDART00000090922.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSDART00000090922.5 dennd4a-201

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Transcript: ENSDART00000090922.5 dennd4a-201

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