Transcript: ENSDART00000090860.7 oxnad1-201

Description

oxidoreductase NAD-binding domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-199]

Gene Synonyms

si:ch211-155k24.7

Location

About this transcript

This transcript has 8 exons, is annotated with 11 domains and features, is associated with 71 variant alleles and maps to 132 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000151237.2	oxnad1-203	2396	270aa	ENSDARP00000125618.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000183513.1	oxnad1-205	1432	275aa	ENSDARP00000146746.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000151693.3	oxnad1-204	1128	306aa	ENSDARP00000125864.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M2BHE3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000090860.7	oxnad1-201	934	277aa	ENSDARP00000085293.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000151059.2	oxnad1-202	757	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 934 bps, Translation length: 277 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000090860.7

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.