Transcript: ENSDART00000090851.5 ydjc-201

Description

YdjC chitooligosaccharide deacetylase homolog [Source:ZFIN;Acc:ZDB-GENE-060526-182]

Gene Synonyms

si:ch211-89f7.6

Location

About this transcript

This transcript has 5 exons, is annotated with 8 domains and features, is associated with 489 variant alleles and maps to 146 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000090851.5	ydjc-201	942	313aa	ENSDARP00000085284.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AB32TRA9 A2BIR6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000182189.1	ydjc-202	1062	313aa	ENSDARP00000153022.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AB32TRA9 A2BIR6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 942 bps, Translation length: 313 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A2BIR6

Version

ENSDART00000090851.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.