Transcript: ENSDART00000090234.6 trim109-201

Description

tripartite motif containing 109 [Source:ZFIN;Acc:ZDB-GENE-060616-101]

Gene Synonyms

cb336, sb:cb336, zgc:136894

Location

About this transcript

This transcript has 6 exons, is annotated with 23 domains and features, is associated with 342 variant alleles and maps to 152 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000090234.6	trim109-201	1765	497aa	ENSDARP00000084667.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1ECU9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,765 bps, Translation length: 497 residues

Version

ENSDART00000090234.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.