Transcript: ENSDART00000090213.6 ndst1a-201

Description

N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1a [Source:ZFIN;Acc:ZDB-GENE-111012-2]

Location

About this transcript

This transcript has 16 exons, is annotated with 14 domains and features, is associated with 1181 variant alleles and maps to 112 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000090213.6	ndst1a-201	7532	869aa	ENSDARP00000084646.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F0G2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000183035.1	ndst1a-202	8357	898aa	ENSDARP00000150373.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000183461.1	ndst1a-203	8270	869aa	ENSDARP00000152968.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F0G2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 16, Coding exons: 15, Transcript length: 7,532 bps, Translation length: 869 residues

Version

ENSDART00000090213.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Annotation Attributes

RNA-Seq supported partial [Definitions]