Transcript: ENSDART00000090079.6 synm-201

Description

synemin, intermediate filament protein [Source:ZFIN;Acc:ZDB-GENE-050419-81]

Location

About this transcript

This transcript has 4 exons, is annotated with 31 domains and features, is associated with 236 variant alleles and maps to 142 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000090079.6	synm-201	3222	1073aa	ENSDARP00000084512.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LX72	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 3,222 bps, Translation length: 1,073 residues

Version

ENSDART00000090079.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.