Transcript: ENSDART00000089965.6 TMEM167A-202

Description

transmembrane protein 167A [Source:ZFIN;Acc:ZDB-GENE-050320-29]

Location

About this transcript

This transcript has 4 exons, is annotated with 14 domains and features, is associated with 289 variant alleles and maps to 252 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000089965.6	TMEM167A-202	1065	72aa	ENSDARP00000084398.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R8Q0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000148293.2	TMEM167A-203	1072	79aa	ENSDARP00000123427.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000138099.2	TMEM167A-201	656	86aa	ENSDARP00000118932.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,065 bps, Translation length: 72 residues

Version

ENSDART00000089965.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.