Transcript: ENSDART00000089853.5 fan1-201

Description

FANCD2 and FANCI associated nuclease 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6225]

Gene Synonyms

fi39f01, si:ch211-163b1.2, si:ch211-201b11.2, wu:fd06a07, wu:fi39f01

Location

About this transcript

This transcript has 14 exons, is annotated with 29 domains and features, is associated with 658 variant alleles and maps to 198 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000089853.5	fan1-201	3591	988aa	ENSDARP00000084286.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AB32T8P4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000182185.1	fan1-202	6203	988aa	ENSDARP00000147160.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AB32T8P4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 14, Coding exons: 13, Transcript length: 3,591 bps, Translation length: 988 residues

Version

ENSDART00000089853.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.