Transcript: ENSDART00000089836.6 JARID2-202

Description

jumonji and AT-rich interaction domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-060503-246]

Location

About this transcript

This transcript has 18 exons, is annotated with 50 domains and features, is associated with 2244 variant alleles and maps to 121 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000089836.6	JARID2-202	4421	1319aa	ENSDARP00000084269.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LVC2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000147627.2	JARID2-201	3915	1304aa	ENSDARP00000114402.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 18, Coding exons: 18, Transcript length: 4,421 bps, Translation length: 1,319 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q1LVC2

Version

ENSDART00000089836.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.