Transcript: ENSDART00000089787.6 edc4-201

Description

enhancer of mRNA decapping 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5032]

Gene Synonyms

fe26b05, si:ch211-237c7.1, wu:fe26b05

Location

Chromosome 18: 21,858,744-21,910,991 reverse strand.

About this transcript

This transcript has 30 exons, is annotated with 28 domains and features, is associated with 1402 variant alleles and maps to 195 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000062266.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000089787.6	edc4-201	8162	1395aa	ENSDARP00000084220.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9P146	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000169220.2	edc4-203	8129	1384aa	ENSDARP00000130250.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000132381.3	edc4-202	6287	1361aa	ENSDARP00000119525.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000191764.1	edc4-204	4053	1350aa	ENSDARP00000148991.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 30, Coding exons: 30, Transcript length: 8,162 bps, Translation length: 1,395 residues

Version

ENSDART00000089787.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Upcoming Ensembl Platform Transition

Transcript: ENSDART00000089787.6 edc4-201

Summary

About Us

Get help

Our sister sites

Follow us

Upcoming Ensembl Platform Transition

Favourite species

All species

Recent locations

Transcript: ENSDART00000089787.6 edc4-201

Summary

About Us

Get help

Our sister sites

Follow us