Transcript: ENSDART00000089603.7 golga7ba-201

Description

golgin A7 family, member Ba [Source:ZFIN;Acc:ZDB-GENE-050417-14]

Gene Synonyms

golga7b, zgc:110549

Location

About this transcript

This transcript has 5 exons, is annotated with 4 domains and features, is associated with 61 variant alleles and maps to 197 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000089603.7	golga7ba-201	3477	173aa	ENSDARP00000084036.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q569P6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000145652.3	golga7ba-202	3360	157aa	ENSDARP00000115467.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QGE2	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 3,477 bps, Translation length: 173 residues

Version

ENSDART00000089603.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.