Transcript: ENSDART00000089408.6 shdb-201

Description

Src homology 2 domain containing transforming protein D, b [Source:ZFIN;Acc:ZDB-GENE-030131-6059]

Gene Synonyms

shd, si:dkeyp-31e2.2, wu:fb38a12, wu:fi32h10, zgc:153246, zgc:153975, zgc:158798

Location

About this transcript

This transcript has 7 exons, is annotated with 19 domains and features, is associated with 1239 variant alleles and maps to 310 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000089408.6	shdb-201	2383	391aa	ENSDARP00000083841.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LX13	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000186091.1	shdb-202	1493	299aa	ENSDARP00000153016.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 2,383 bps, Translation length: 391 residues

Version

ENSDART00000089408.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.