Transcript: ENSDART00000089386.6 iffo1b-201

Description

intermediate filament family orphan 1 [Source:HGNC Symbol;Acc:HGNC:24970]

Location

About this transcript

This transcript has 9 exons, is annotated with 26 domains and features, is associated with 580 variant alleles and maps to 68 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000089386.6	iffo1b-201	2447	640aa	ENSDARP00000083819.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FC27	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000123011.3	iffo1b-202	1866	621aa	ENSDARP00000105038.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000136504.2	iffo1b-203	730	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 2,447 bps, Translation length: 640 residues

Version

ENSDART00000089386.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.