Transcript: ENSDART00000088914.5 amotl2a-201

Description

angiomotin like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-9770]

Gene Synonyms

amotl2, cb308, sb:cb308, wu:fc41b07, wu:fc64c06

Location

Chromosome 6: 27,992,001-28,001,090 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 30 domains and features, is associated with 204 variant alleles and maps to 313 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000061923.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000088914.5	amotl2a-201	4147	721aa	ENSDARP00000083347.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AB32TV13 A1YB07	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000160354.2	amotl2a-205	3962	721aa	ENSDARP00000134595.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AB32TV13 A1YB07	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000143974.2	amotl2a-204	615	130aa	ENSDARP00000118007.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000141354.2	amotl2a-203	557	185aa	ENSDARP00000116113.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000139367.2	amotl2a-202	242	40aa	ENSDARP00000121125.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 4,147 bps, Translation length: 721 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A1YB07

Version

ENSDART00000088914.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

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Transcript: ENSDART00000088914.5 amotl2a-201

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Transcript: ENSDART00000088914.5 amotl2a-201

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