Transcript: ENSDART00000088605.7 IFT46-201

Description

intraflagellar transport 46 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-080102-3]

Location

About this transcript

This transcript has 12 exons, is annotated with 10 domains and features, is associated with 322 variant alleles and maps to 174 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000088605.7	IFT46-201	1592	355aa	ENSDARP00000083038.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QMN4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000149772.2	IFT46-202	777	135aa	ENSDARP00000124580.1	Nonsense mediated decay	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 1,592 bps, Translation length: 355 residues

Version

ENSDART00000088605.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.