Transcript: ENSDART00000088340.5 tpd52-201

Description

tumor protein D52 [Source:ZFIN;Acc:ZDB-GENE-060503-680]

Gene Synonyms

si:ch211-203l9.2, si:ch211-203l9.3

Location

About this transcript

This transcript has 6 exons, is annotated with 5 domains and features, is associated with 663 variant alleles and maps to 218 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000088340.5	tpd52-201	924	187aa	ENSDARP00000082773.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A3KNM2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000151218.2	tpd52-202	885	201aa	ENSDARP00000126183.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000151280.3	tpd52-203	854	196aa	ENSDARP00000126099.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3IT45	-
ENSDART00000162297.2	tpd52-204	836	210aa	ENSDARP00000132427.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IDA7	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 924 bps, Translation length: 187 residues

Version

ENSDART00000088340.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.