Transcript: ENSDART00000088290.7 RAPH1-202

Description

Ras association (RalGDS/AF-6) and pleckstrin homology domains 1b [Source:ZFIN;Acc:ZDB-GENE-090311-54]

Location

About this transcript

This transcript has 15 exons, is annotated with 75 domains and features, is associated with 1535 variant alleles and maps to 289 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000088290.7	RAPH1-202	6134	1511aa	ENSDARP00000082723.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QZE7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000154342.3	RAPH1-203	4086	925aa	ENSDARP00000128517.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000136066.2	RAPH1-201	614	161aa	ENSDARP00000118277.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 15, Coding exons: 13, Transcript length: 6,134 bps, Translation length: 1,511 residues

Version

ENSDART00000088290.7

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.