Transcript: ENSDART00000088265.6 atxn1a-201

Description

ataxin 1a [Source:ZFIN;Acc:ZDB-GENE-060503-759]

Gene Synonyms

atxn1b, si:ch211-125a6.1

Location

Chromosome 19: 32,456,974-32,461,596 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 31 domains and features, is associated with 235 variant alleles and maps to 148 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000061687.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000088265.6	atxn1a-201	2346	781aa	ENSDARP00000082698.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1L966	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000184353.1	atxn1a-203	3309	781aa	ENSDARP00000153062.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1L966	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000186471.1	atxn1a-204	2995	781aa	ENSDARP00000144834.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1L966	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000167664.2	atxn1a-202	2949	781aa	ENSDARP00000134028.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1L966	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 2,346 bps, Translation length: 781 residues

Version

ENSDART00000088265.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

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Transcript: ENSDART00000088265.6 atxn1a-201

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Transcript: ENSDART00000088265.6 atxn1a-201

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