Transcript: ENSDART00000087918.7 slc7a3b-201

Description

solute carrier family 7 member 3b [Source:ZFIN;Acc:ZDB-GENE-120813-6]

Location

About this transcript

This transcript has 12 exons, is annotated with 63 domains and features, is associated with 627 variant alleles and maps to 187 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000087918.7	slc7a3b-201	5314	698aa	ENSDARP00000082351.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QNI7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000182958.1	slc7a3b-203	5201	646aa	ENSDARP00000152961.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000172809.2	slc7a3b-202	807	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 5,314 bps, Translation length: 698 residues

Version

ENSDART00000087918.7

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]